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SODA for SPARC

website·Indexed 33 days ago

https://docs.sodaforsparc.io/

Documentation for SODA (Soft-copy Dataset Assistant), a tool designed to help users create SDS-compliant datasets for SPARC. It provides guidance on FAIR data principles, dataset curation, and integration with Pennsieve, including instructions for uploading datasets, managing the Pennsieve Agent, and connecting via API keys or credentials.

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What's inside SODA

  1. Overview of SODA for data sharing

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application that helps researchers prepare and share peripheral nervous system (PNS) related data and models. It automates the process of making datasets compliant with the SPARC Data Structure (SDS) to ensure they are Findable, Accessible, Interoperable, and Reusable (FAIR). SODA can be used to publish data to the SPARC Data Portal (an open repository as of January 2023) or to generate SDS-compliant datasets for other repositories such as Zenodo.

  2. Overview of SODA for SPARC

    SODA (Software to Organize Data Automatically) for SPARC is a cross-platform desktop application designed for biomedical researchers to prepare and share bioelectronic, neurophysiology, and similar data and computational models. It automates the process of making datasets compliant with the NIH Data Sharing Policy and the SPARC data curation and sharing guidelines, facilitating publication on the SPARC Data Portal (an open repository as of January 2023).

  3. Overview of SODA for FAIR data organization

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application designed to help researchers prepare and share peripheral nervous system (PNS) related data and models. It guides users in organizing datasets to be compliant with the SPARC Dataset Structure (SDS), ensuring the data is FAIR (Findable, Accessible, Interoperable, and Reusable). Once organized, SODA facilitates the submission of these datasets to the SPARC Data Portal or general repositories like Zenodo.

  4. Overview of SODA for FAIR data organization

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application designed to help researchers prepare and share peripheral nervous system (PNS) related data and models. It guides users through the process of organizing datasets to be compliant with the SPARC Dataset Structure (SDS) and facilitates submission to the SPARC Data Portal or general repositories like Zenodo. Since January 2023, SODA and the SPARC Data Portal are open to all researchers regardless of their funding source, aiding in compliance with the NIH Data Sharing Policy.

  5. Overview of SODA for FAIR data organization

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application designed to help researchers prepare and share peripheral nervous system (PNS) related data and models. It guides users in organizing datasets to be compliant with the SPARC Dataset Structure (SDS), ensuring the data is FAIR (Findable, Accessible, Interoperable, and Reusable). Once organized, SODA facilitates the submission of these datasets to the SPARC Data Portal or general repositories like Zenodo.

  6. Overview of the Prepare Dataset Step-by-Step feature

    The Prepare Dataset Step-by-Step feature in SODA (v17.1.0) guides users through preparing a dataset that complies with the Sparc Dataset Structure (SDS). The process ensures datasets are organized correctly and accompanied by a manifest file without requiring prior knowledge of the SDS. Once prepared, users can share the dataset on the SPARC Portal or generalist repositories like Zenodo. Note: SPARC-funded researchers are required to share their datasets on the SPARC Portal.

  7. Overview of the Prepare Dataset Step-by-Step feature

    The Prepare Dataset Step-by-Step feature guides users through preparing a dataset according to the Sparc Dataset Structure (SDS) without requiring prior knowledge or external documentation. The process concludes with guidance on sharing the dataset via the SPARC Portal or generalist repositories such as Zenodo. Note: SPARC-funded researchers are mandated to share their datasets on the SPARC Portal.

  8. Overview of the Prepare Dataset Step-by-Step feature

    The Prepare Dataset Step-by-Step feature guides users through preparing a dataset that complies with the Sparc Dataset Structure (SDS) without requiring prior knowledge or external documentation. The process concludes by guiding the user to share the dataset on the SPARC Portal or a generalist repository such as Zenodo. Note: SPARC-funded researchers are mandated to share their datasets on the SPARC Portal.

  9. Overview of the Prepare Dataset Step-by-Step feature

    The Prepare Dataset Step-by-Step feature guides users through preparing a dataset that complies with the Sparc Dataset Structure (SDS) without requiring prior knowledge or external documentation. The process concludes with guidance on sharing the dataset on the SPARC Portal or generalist repositories such as Zenodo. Note: SPARC-funded researchers are mandated to share their datasets on the SPARC Portal.

  10. Overview of SODA for FAIR data organization

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application designed to help researchers prepare and share peripheral nervous system (PNS) related data and models. It guides users through the process of organizing datasets to be compliant with the SPARC Dataset Structure (SDS), ensuring the data is FAIR (Findable, Accessible, Interoperable, and Reusable). Once organized, SODA facilitates the submission of these datasets to the SPARC Data Portal or general repositories like Zenodo.

  11. Overview of SODA for FAIR data organization

    SODA (Software to Organize Data Automatically) is a cross-platform desktop application designed to help researchers prepare and share peripheral nervous system (PNS) related data and computational models. It guides users in organizing data according to the SPARC Dataset Structure (SDS) to ensure the data is FAIR (Findable, Accessible, Interoperable, and Reusable). Once organized, SODA facilitates the submission of datasets to the SPARC Data Portal or general repositories like Zenodo.

  12. Overview of the Prepare Dataset Step-by-Step feature

    The Prepare Dataset Step-by-Step feature guides users through preparing a dataset that complies with the Sparc Dataset Structure (SDS) without requiring prior knowledge or external documentation. The process concludes with guidance on sharing the dataset via the SPARC Portal or generalist repositories like Zenodo. Note: SPARC-funded researchers are mandated to share their datasets on the SPARC Portal.