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TwoSampleMR Documentation

repository·master·Indexed 20 days ago

https://github.com/mrcieu/twosamplemr

An R package for performing Mendelian randomization using GWAS summary data. It features automated data retrieval via the IEU OpenGWAS database and provides various methods for conducting Mendelian randomization analyses.

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What's inside TwoSampleMR

  2. Use TwoSampleMR via Docker

    master

    A multi-platform Docker image is available for both x86_64 and ARM architectures. This image comes with R and the TwoSampleMR package pre-installed. You can find the image on Docker Hub.

    https://hub.docker.com/r/mrcieu/twosamplemr

  3. Install TwoSampleMR on Windows or macOS

    master

    To install the latest version of TwoSampleMR on Windows or macOS, use the MRC IEU r-universe repository. This is the recommended method for these operating systems.

    install.packages("TwoSampleMR", repos = c("https://mrcieu.r-universe.dev", "https://cloud.r-project.org"))

  4. Install TwoSampleMR from source via GitHub

    master

    If you need to install the package directly from the GitHub source, use the remotes package to install MRCIEU/TwoSampleMR.

    install.packages("remotes")
remotes::install_github("MRCIEU/TwoSampleMR")

  5. Access the TwoSampleMR documentation

    master

    The complete, detailed documentation for the TwoSampleMR package, including guides, API references, and tutorials, is hosted externally. For in-depth information beyond the repository README, visit the official documentation site.

    https://mrcieu.github.io/TwoSampleMR/